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Amazon Sagemaker

Amazon SageMaker is a fully-managed platform that enables developers and data scientists to quickly and easily build, train, and deploy machine learning models at any scale. With Amazon SageMaker, all the barriers and complexity that typically slow down developers who want to use machine learning are removed. The service includes models that can be used together or independently to build, train, and deploy your machine learning models.

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Customized Chest CT Anomaly Segmentation

Latest Version:
1.0
This deep learning based solution provides chest CT analysis with precise segmentation of various anomalies and chest conditions.

    Product Overview

    Customized Chest CT Anomaly Segmentation is an advanced deep learning solution specifically designed for chest CT-scan diagnosis. The solution utilizes state-of-the-art biomedical segmentation deep learning models and frameworks. It performs semantic segmentation on a wide range of chest anomalies and conditions, including tumors, infections, and lung diseases. This solution automates chest CT segmentation, reduces diagnosis time and aids in early detection and treatment planning.

    Key Data

    Type
    Algorithm
    Fulfillment Methods
    Amazon SageMaker

    Highlights

    • The solution takes a contextual information learning approach to efficiently segment anomalies in chest CT scans and reduces the need of large labelled dataset for training. Leveraging this solution health care pracitioniers can use a small set of labelled data to understand the anomaly or other chest condition and perform segmentation on a much larger set of unlabelled samples.

    • The solution is equipped with the capbility of precisely performing fine grained segmentation i.e sparsely labels where only a small and disburse parts of CT scan images is of interest. Our solution is recommended to be used as an assistant to the health care practitioners for large volume of data.

    • PACE - ML is Mphasis Framework and Methodology for end-to-end machine learning development and deployment. PACE-ML enables organizations to improve the quality & reliability of the machine learning solutions in production and helps automate, scale, and monitor them. Need customized Machine Learning and Deep Learning solutions? Get in touch!

    Not quite sure what you’re looking for? AWS Marketplace can help you find the right solution for your use case. Contact us

    Pricing Information

    Use this tool to estimate the software and infrastructure costs based your configuration choices. Your usage and costs might be different from this estimate. They will be reflected on your monthly AWS billing reports.

    Contact us to request contract pricing for this product.


    Estimating your costs

    Choose your region and launch option to see the pricing details. Then, modify the estimated price by choosing different instance types.

    Version
    Region

    Software Pricing

    Algorithm Training$10/hr

    running on ml.g5.2xlarge

    Model Realtime Inference$5.00/hr

    running on ml.p2.xlarge

    Model Batch Transform$5.00/hr

    running on ml.p2.xlarge

    Infrastructure Pricing

    With Amazon SageMaker, you pay only for what you use. Training and inference is billed by the second, with no minimum fees and no upfront commitments. Pricing within Amazon SageMaker is broken down by on-demand ML instances, ML storage, and fees for data processing in notebooks and inference instances.
    Learn more about SageMaker pricing

    SageMaker Algorithm Training$1.515/host/hr

    running on ml.g5.2xlarge

    SageMaker Realtime Inference$1.125/host/hr

    running on ml.p2.xlarge

    SageMaker Batch Transform$1.125/host/hr

    running on ml.p2.xlarge

    Algorithm Training

    For algorithm training in Amazon SageMaker, the software is priced based on hourly pricing that can vary by instance type. Additional infrastructure cost, taxes or fees may apply.
    InstanceType
    Algorithm/hr
    ml.p2.xlarge
    $10.00
    ml.g4dn.4xlarge
    $10.00
    ml.g4dn.16xlarge
    $10.00
    ml.p2.16xlarge
    $10.00
    ml.p3.16xlarge
    $10.00
    ml.g5.xlarge
    $10.00
    ml.g5.8xlarge
    $10.00
    ml.g5.12xlarge
    $10.00
    ml.g4dn.2xlarge
    $10.00
    ml.g5.4xlarge
    $10.00
    ml.g5.16xlarge
    $10.00
    ml.p5.48xlarge
    $10.00
    ml.trn1.2xlarge
    $10.00
    ml.p3.8xlarge
    $10.00
    ml.p3.2xlarge
    $10.00
    ml.p2.8xlarge
    $10.00
    ml.g4dn.8xlarge
    $10.00
    ml.g4dn.12xlarge
    $10.00
    ml.p4d.24xlarge
    $10.00
    ml.trn1.32xlarge
    $10.00
    ml.g5.2xlarge
    Vendor Recommended
    $10.00
    ml.g4dn.xlarge
    $10.00
    ml.g5.48xlarge
    $10.00
    ml.g5.24xlarge
    $10.00

    Usage Information

    Training

    The training data should contain two folders "frames" and "masks". The frames folder should have the raw chest CT Scans images and the masks should have the corresponding labels of the anomalies. These two folders should be zipped and provided as a file "train_data.zip".

    To have a robust model checkpoint, it is recommended to increase the epochs and batch size while training (as hyperparameters).

    Here is a sample train data: https://github.com/Mphasis-ML-Marketplace/medseglab-demo/blob/main/input/train_data.zip

    Channel specification

    Fields marked with * are required

    training

    *
    Input modes: File
    Content types: application/zip, application/gzip
    Compression types: None, Gzip

    Hyperparameters

    Fields marked with * are required

    bs

    *
    Training Batch Size
    Type: Integer
    Tunable: No

    epochs

    *
    Training Epochs
    Type: Integer
    Tunable: No

    Model input and output details

    Input

    Summary

    For batch transform jobs, it is expected to a zip file named "frames.zip" that has a folder named "frames" which containes all the images to be labeled.

    For real time inference, one can provide a single PNG/JPEG image binary file.

    Limitations for input type
    The recommended image input shape is 224 x 224 pixels.
    Input MIME type
    application/zip, application/gzip, image/png, image/jpeg
    Sample input data

    Output

    Summary

    For batch transform output, the endpoint will return a zipped file that will contain labels for all the raw images provided in frames.zip input file.

    For real time inference, for a single PNG/JPEG image file, the model will return the labeled image in PNG/JPEG format.

    For sample output, please check the demo notebook.

    Output MIME type
    application/zip, application/gzip, image/png, image/jpeg
    Sample output data

    Additional Resources

    End User License Agreement

    By subscribing to this product you agree to terms and conditions outlined in the product End user License Agreement (EULA)

    Support Information

    Customized Chest CT Anomaly Segmentation

    For any assistance, please reach out at:

    AWS Infrastructure

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    Refund Policy

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