AWS for Industries
Author: Mike Lin
Mike is an open-source developer in genome informatics, researching methods and tools to make genomic data analysis more efficient, scalable, and portable. He has held senior science and engineering roles at DNAnexus, and he completed a PhD in computational genomics at MIT and the Broad Institute. Operating independently from Honolulu, he’s always open to new collaborations.
Using miniwdl, GWFCore, and SageMaker Studio as a cloud IDE for genomics workflows
To keep pace with the growing scale of genomics datasets, bioinformatics scientists rely on shared analysis workflows written with portable standards such as the Workflow Description Language (WDL). The race to track SARS-CoV-2 variants notably illustrates rapid deployment of such workflows at scale on many platforms, including AWS. This post presents a new solution for […]