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What's the Difference Between AWS HealthOmics and AWS HealthScribe?

Compare AWS HealthOmics and AWS HealthScribe side by side — features, pricing, and ideal use cases to help you choose the right product.

Compare side-by-side

AWS closed AWS HealthOmics variant stores and annotation stores to new customers, effective November 7, 2025. Existing customers can continue to use them. The HealthOmics sequence store and workflows remain available to new customers.

Comparisons
AWS HealthOmics
AWS HealthScribe
Category

Machine Learning, Genomics

Machine Learning, Healthcare AI
Description

Store, query, and analyze genomic, transcriptomic, and other omics data at scale.

Generate clinical notes from patient-clinician conversations using generative AI.
Best for
  • Genomic analysis
  • Variant calling
  • Multiomics research
  • Precision medicine
  • Clinical documentation
  • Medical transcription
  • EHR integration
  • Clinical note generation
Key features
  • Sequence Store
  • Variant Store
  • Annotation Store
  • Workflow engine
  • Ready2Run workflows
  • Conversation transcription
  • Clinical note generation
  • Structured output
  • HIPAA eligible
  • API access
Pricing model

Pay per GB stored + run hours + queries

Pay per minute of audio processed
Free tier

New AWS customers: monthly allowances for the first 2 months include 275 omics.m.xlarge instance hours (or equivalent) and 49,000 GB-hours of private-workflow run storage; sequence-store allowances of 1,500 gigabase-months each in active and archive storage. Excludes AWS GovCloud (US) Regions; unused monthly usage does not roll over. Restrictions apply. Variant and annotation stores are closed to new customers.

No
Expert take

“HealthOmics stores and analyzes genomic data at petabyte scale. Ready-to-run workflows process whole genomes in hours using optimized bioinformatics pipelines.”
— Gary McLean, re:Post Top Contributor [profile]

“HealthScribe generates clinical documentation from patient-clinician conversations. It extracts medical terms, produces structured notes, and integrates with EHR systems.”
— Gary McLean, re:Post Top Contributor [profile]
Product page

Learn more about AWS HealthOmics »

Learn more about AWS HealthScribe »

When to use AWS HealthOmics or AWS HealthScribe

Use AWS HealthOmics when:

  • Genomic analysis
  • Variant calling
  • Multiomics research
  • Precision medicine

Learn more about AWS HealthOmics »

Use AWS HealthScribe when:

  • Clinical documentation
  • Medical transcription
  • EHR integration
  • Clinical note generation

Learn more about AWS HealthScribe »

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