AWS Public Sector Blog

Tag: research

close up of laptop showing tracking of sharks via OCEARCH along the US Carolina coastline

Assessing the ocean’s health by monitoring shark populations

OCEARCH is a data-centric organization built to help scientists collect previously unattainable data about the ocean. Their mission is to accelerate the ocean’s return to balance and abundance, through innovation in scientific research, education, outreach, and policy, using unique collaborations of individuals and organizations in the US and abroad. As part of the Amazon Sustainability Data Initiative (ASDI), we invited Fernanda Ubatuba, president and COO at OCEARCH, to share how her organization is making strides in helping ocean conservation and how AWS is supporting her mission.

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Using big data to help governments make better policy decisions

In Europe, government agencies and policy makers see the value in using new technology to unlock digital transformation and deliver better, more innovative citizen services. Using data for statistics initiatives, including open data, can help researchers produce innovative products and tools, including visualisation, to inform government officials ahead of making policy decisions that impact their citizens. When it comes to big data, policy makers need to collaborate with researchers to address issues and challenges in using these new data sources. To work toward this goal, Eurostat, the statistical office of the EU, hosted its bi-annual European Big Data Hackathon.

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human genome

Accelerating genome assembly with AWS Graviton2

One of the biggest scientific achievements of the twenty-first century was the completion of the Human Genome Project and the publication of a draft human genome. The project took over 13 years to complete and remains one of the largest private-public international collaborations ever. Advances since in sequencing technologies, computational hardware, and novel algorithms reduced the time it takes to produce a human genome assembly to only a few days, at a fraction of the cost. This made using the human genome draft for precision and personalized medicine more achievable. In this blog, we demonstrate how to do a genome assembly in the cloud in a cost-efficient manner using ARM-based AWS Graviton2 instances.

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Lake Michigan lighthouse

Modeling clouds in the cloud for air pollution planning: 3 tips from LADCO on using HPC

In the spring of 2019, environmental modelers at the Lake Michigan Air Directors Consortium (LADCO) had a new problem to solve. Emerging research on air pollution along the shores of the Great Lakes in the United States showed that to properly simulate the pollution episodes in the region we needed to apply our models at a finer spatial granularity than the computational capacity of our in-house HPC cluster could handle. The LADCO modelers turned to AWS ParallelCluster to access the HPC resources needed to do this modeling faster and scale for our member states.

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RONIN with one AWS account

Inside a self-service cloud research computing platform: How RONIN is built on AWS

RONIN is an AWS Partner solution that empowers researchers with a simple interface to create and control computing resources, set and monitor budgets, and forecast spend. RONIN is designed and architected to advance research institutions’ missions, by providing a research platform that manages the most common research use cases, and is also compatible with advanced cloud computing services from AWS. Learn what powers RONIN underneath the user-friendly interface.

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Building the first quantum computing applications lab in India

The Ministry of Electronics and Information Technology (MeitY) in India is establishing a Quantum Computing Applications Lab, in collaboration with AWS, to accelerate quantum computing-led research and development and enable new scientific discoveries. This is MeitY’s first initiative in the country to provide scientific, academic, and developer communities with access to a quantum computing development environment in the cloud. This is also the first quantum computing applications lab on AWS Cloud to support a government’s science and technology mission at a country level.

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Sharing SAS data with Athena and ODBC

Sharing SAS data with Athena and ODBC

If you share data with other researchers, especially if they are using a different tool, you can quickly run into version issues, not knowing which file is the most current. Rather than sending data files everywhere, AWS offers a simple way to store your data in one central location so that you can read your data into SAS and still share it with other colleagues. In this blog post, I will explain how to export your data, store it in AWS, and query the data using SAS.

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RONIN for research screengrab

Announcing research computing with RONIN on AWS

To allow more visibility into and management of AWS resources and expenses and minimize the cloud skills training required to operate these resources, AWS Partner RONIN created the RONIN research computing platform. RONIN gives researchers the ability to create exactly the computers or storage that they need in minutes. With access to the flexibility and scalability of the cloud, researchers are able to store and process larger datasets, collaborate globally, and adapt to changing technologies and research methods instantly.

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A generalized approach to benchmarking genomics workloads in the cloud: Running the BWA read aligner on Graviton2

The AWS Cloud gives genomics researchers access to a wide variety of instance types and chip architectures and this elasticity allows us to rethink genomics workflows when running workloads in the cloud. Given the increased performance of the Graviton2 instances, we wanted to explore if they can be used for cost-effective and performant genomics workloads. Read on to learn about our generalized approach for determining the most effective instance type for running genomics workloads in the cloud.

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MATLAB Web App Server AWS

Sharing MATLAB applications on AWS using the MATLAB Web App Server

If you are a researcher or scientist, you may be familiar with MATLAB, a computational analysis tool produced by Mathworks. And if you work in higher education, you may work with individuals and groups outside of your organization for data collection or the analysis of that data. Learn how to extend the reach of MATLAB applications on AWS by using the MATLAB Web App Server.

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