
Overview
With recent advances in machine learning, semantic segmentation algorithms are becoming increasingly general purpose and translatable to unseen tasks. Many key algorithmic advances in the field of medical imaging are commonly validated on a small number of tasks, limiting our understanding of the generalisability of the proposed contributions. A model which works out-of-the-box on many tasks, in the spirit of AutoML, would have a tremendous impact on healthcare. The field of medical imaging is also missing a fully open source and comprehensive benchmark for general purpose algorithmic validation and testing covering a large span of challenges, such as: small data, unbalanced labels, large-ranging object scales, multi-class labels, and multimodal imaging, etc. This challenge and dataset aims to provide such resource through the open sourcing of large medical imaging datasets on several highly different tasks, and by standardising the analysis and validation process.
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AWS Data Exchange (ADX)
AWS Data Exchange is a service that helps AWS easily share and manage data entitlements from other organizations at scale.
Open data resources
Available with or without an AWS account.
- How to use
- To access these resources, reference the Amazon Resource Name (ARN) using the AWS Command Line Interface (CLI). Learn more
- Description
- Ten tasks from the Medical Segmentation Decathlon Challenge. Tasks are organized by organ system and pathology, as follow, Liver Tumours; Brain Tumours; Hippocampus; Lung Tumours; Prostate; Cardiac; Pancreas Tumour; Colon Cancer; Hepatic Vasculature; Spleen. Tasks are provided in both tar.gz and uncompressed format.
- Resource type
- S3 bucket
- Amazon Resource Name (ARN)
- arn:aws:s3:::msd-for-monai
- AWS region
- us-west-2
- AWS CLI access (No AWS account required)
- aws s3 ls --no-sign-request s3://msd-for-monai/
- Description
- This is a mirror of s3://msd-for-monai in eu-west-2.
- Resource type
- S3 bucket
- Amazon Resource Name (ARN)
- arn:aws:s3:::msd-for-monai-eu
- AWS region
- eu-west-2
- AWS CLI access (No AWS account required)
- aws s3 ls --no-sign-request s3://msd-for-monai-eu/
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Medical Segmentation Decathlon was accessed on DATE from https://registry.opendata.aws/msd .
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