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Genome Aggregation Database (AWS Lake Formation Test Product)

Provided By: Amazon Web Services

Genome Aggregation Database (AWS Lake Formation Test Product)

Provided By: Amazon Web Services

Use Genome Aggregation Database (gnomAD) (AWS Lake Formation Test Product) to understand how to interact with data made available via AWS Lake Formation.

Product offers

The following offers are available for this product. Choose an offer to view the pricing and access duration options for the offer. Select an offer and continue to subscribe. Your subscription begins on the date that your request is approved by the provider. Additional taxes or fees might apply.

Public offer

Payment schedule: Upfront payment | Offer auto-renewal: Not supported
$0 for 1 month

Overview

Open this product detail page to access the AWS Open Data version of this data set. This AWS Data Exchange-published product contains a snapshot from the open data set "Genome Aggregation Database (gnomAD) - Data Lakehouse Ready" as of November 2022.

The Genome Aggregation Database (gnomAD)  is a resource developed by an international coalition of investigators that aggregates and harmonizes both exome and genome data from a wide range of large-scale human sequencing projects Sign up for the gnomAD mailing list (here)http://broad.io/gnomad_list.

For instructions on how to use this product, please follow the steps in AWS's free, public Workshop: Query third-party data with AWS Lake Formation 

Fulfillment Method
AWS Data Exchange

Data dictionaries

A data dictionary is a visual representation of the contents of a data set. The data represented here is for evaluation purposes only and may not accurately represent the actual content of the product.

  • ...
Field name
Description
Example
Data type
Primary key
Nullable
Max length
Data set
Table name
Table description
locus.contig
-
-
string
-
-
-
Genome Aggregation Database (gnomAD)
sites
locus.position
-
-
int
-
-
-
Genome Aggregation Database (gnomAD)
sites
alleles
-
-
list
-
-
-
Genome Aggregation Database (gnomAD)
sites
rsid
-
-
string
-
-
-
Genome Aggregation Database (gnomAD)
sites
qual
-
-
double precision
-
-
-
Genome Aggregation Database (gnomAD)
sites
filters
-
-
list
-
-
-
Genome Aggregation Database (gnomAD)
sites
info.ac
-
-
list
-
-
-
Genome Aggregation Database (gnomAD)
sites
info.an
-
-
int
-
-
-
Genome Aggregation Database (gnomAD)
sites
info.af
-
-
list
-
-
-
Genome Aggregation Database (gnomAD)
sites
info.popmax
-
-
list
-
-
-
Genome Aggregation Database (gnomAD)
sites

Data sets (3)

You will receive access to the following data sets

Revision access rules
All historical revisions | All future revisions
Name
Type
Data dictionary
AWS Region
Genome Aggregation Database (gnomAD)
Included
US East (N. Virginia)
Genome Aggregation data
Not included
US East (N. Virginia)
Genome Aggregation data
Not included
US East (N. Virginia)

Data dictionaries and samples

Sample data is for evaluation purposes only and may not accurately represent the actual content of the product.

Name
Resource
File type
File size
Description
Genome Aggregation Database (gnomAD)
Data set
-
-
-
Data dictionary
Data dictionary
text/csv
-
Genome Aggregation data
Data set
-
-
-
Genome Aggregation data
Data set
-
-
-

Usage information

By subscribing to this product, you agree that your use of this product is subject to the provider's offer terms including pricing information and Data Subscription Agreement . Your use of AWS services remains subject to the AWS Customer Agreement  or other agreement with AWS governing your use of such services.

Support information

Support contact email address
Support contact URL
-
Refund policy
No refunds
General AWS Data Exchange support