Open data
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Deployed on AWS
The Alliance of Genome Resources is a consortium that integrates genomic, genetic, and molecular data from leading model organism databases including Drosophila melanogaster, Caenorhabditis elegans, Danio rerio (zebrafish), Mus musculus (mouse), Rattus norvegicus (rat), Saccharomyces cerevisiae (yeast), Xenopus laevis and Xenopus tropicalis (frogs), and human reference data. The Alliance provides comprehensive datasets including gene annotations, disease associations, expression data (bulk and single-cell RNA-Seq), protein and genetic interactions, orthology relationships, variants and alleles, and complete genome sequences with annotations. Data is organized into Alliance-wide integrated datasets and organism-specific collections, supporting comparative genomics, disease modeling, and functional genomics research.
Overview
The Alliance of Genome Resources is a consortium that integrates genomic, genetic, and molecular data from leading model organism databases including Drosophila melanogaster, Caenorhabditis elegans, Danio rerio (zebrafish), Mus musculus (mouse), Rattus norvegicus (rat), Saccharomyces cerevisiae (yeast), Xenopus laevis and Xenopus tropicalis (frogs), and human reference data. The Alliance provides comprehensive datasets including gene annotations, disease associations, expression data (bulk and single-cell RNA-Seq), protein and genetic interactions, orthology relationships, variants and alleles, and complete genome sequences with annotations. Data is organized into Alliance-wide integrated datasets and organism-specific collections, supporting comparative genomics, disease modeling, and functional genomics research.
Features and programs
Open Data Sponsorship Program
This dataset is part of the Open Data Sponsorship Program, an AWS program that covers the cost of storage for publicly available high-value cloud-optimized datasets.
Pricing
This is a publicly available data set. No subscription is required.
Legal
Content disclaimer
Vendors are responsible for their product descriptions and other product content. AWS does not warrant that vendors' product descriptions or other product content are accurate, complete, reliable, current, or error-free.
Delivery details
AWS Data Exchange (ADX)
AWS Data Exchange is a service that helps AWS easily share and manage data entitlements from other organizations at scale.
Open data resources
Available with or without an AWS account.
- How to use
- To access these resources, reference the Amazon Resource Name (ARN) using the AWS Command Line Interface (CLI). Learn more
- Description
- Alliance-wide integrated datasets including disease associations, gene expression, molecular and genetic interactions, orthology relationships, gene descriptions, and variants across all Alliance organisms. Data is organized by release version (8.3.0/, 8.2.0/, etc.), then by data type, with organism-specific collections for FB (FlyBase/Drosophila), MGI (Mouse), RGD (Rat), SGD (Yeast), WB (Worm), XBXL/XBXT (Xenopus), ZFIN (Zebrafish), and HUMAN reference data. Available in TSV, JSON, and VCF formats.
- Resource type
- S3 bucket
- Amazon Resource Name (ARN)
- arn:aws:s3:::alliance-genome-downloads
- AWS region
- us-east-1
- AWS CLI access (No AWS account required)
- aws s3 ls --no-sign-request s3://alliance-genome-downloads/
- Description
- FlyBase-specific data for Drosophila melanogaster and related species, including gene annotations, GO annotations, expression data (bulk RNA-Seq, single-cell RNA-Seq), disease associations, phenotypes, interactions, orthologs, genome sequences (FASTA), and genome annotations (GFF3/GTF). Data organized by release (current/, FB2025_04/, etc.) with precomputed analysis files and complete Chado XML database dumps. Publicly accessible via HTTPS for direct download without AWS credentials.
- Resource type
- S3 bucket
- Amazon Resource Name (ARN)
- arn:aws:s3:::s3ftp.flybase.org
- AWS region
- us-east-1
- AWS CLI access (No AWS account required)
- aws s3 ls --no-sign-request s3://s3ftp.flybase.org/
Resources
Vendor resources
Support
Contact
Managed By
Alliance of Genome Resources Consortium
How to cite
Alliance of Genome Resources was accessed on DATE from https://registry.opendata.aws/alliance-genome-resources .
License
Most Alliance data is available under CC0 1.0 Universal (Public Domain Dedication). Some datasets may use CC-BY 4.0 (attribution required). Full details at https://www.alliancegenome.org/terms-of-use
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