Sold by: Louisiana State University
Open data
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Deployed on AWS
DPEB is a multimodal database of human protein embeddings integrating four biologically complementary representations—AlphaFold2, BioEmbeddings, ESM-2, and ProtVec—designed for enhanced protein-protein interaction prediction and functional classification.
Overview
DPEB is a multimodal database of human protein embeddings integrating four biologically complementary representations—AlphaFold2, BioEmbeddings, ESM-2, and ProtVec—designed for enhanced protein-protein interaction prediction and functional classification.
Features and programs
Open Data Sponsorship Program
This dataset is part of the Open Data Sponsorship Program, an AWS program that covers the cost of storage for publicly available high-value cloud-optimized datasets.
Pricing
This is a publicly available data set. No subscription is required.
Legal
Content disclaimer
Vendors are responsible for their product descriptions and other product content. AWS does not warrant that vendors' product descriptions or other product content are accurate, complete, reliable, current, or error-free.
Delivery details
AWS Data Exchange (ADX)
AWS Data Exchange is a service that helps AWS easily share and manage data entitlements from other organizations at scale.
Open data resources
Available with or without an AWS account.
- How to use
- To access these resources, reference the Amazon Resource Name (ARN) using the AWS Command Line Interface (CLI). Learn more
- Description
- Multimodal human protein embeddings (AlphaFold2, BioEmbeddings, ESM-2, ProtVec) with JSONL-formatted metadata containing FASTA, UniProt IDs, and embeddings.
- Resource type
- S3 bucket
- Amazon Resource Name (ARN)
- arn:aws:s3:::deepdrug-dpeb
- AWS region
- us-west-2
- AWS CLI access (No AWS account required)
- aws s3 ls --no-sign-request s3://deepdrug-dpeb/
Resources
Vendor resources
Support
Managed By
Louisiana State University
How to cite
DeepDrug Protein Embeddings Bank (DPEB) was accessed on DATE from https://registry.opendata.aws/deepdrug-dpeb .
License
MIT