Open data
|
Deployed on AWS
This dataset consists of whole genome sequencing (WGS), whole exome sequencing (WES), and RNA sequencing files generated from ~1000 cancer cell lines described in Ghandi et al., 2019.
Overview
This dataset consists of whole genome sequencing (WGS), whole exome sequencing (WES), and RNA sequencing files generated from ~1000 cancer cell lines described in Ghandi et al., 2019.
Features and programs
Open Data Sponsorship Program
This dataset is part of the Open Data Sponsorship Program, an AWS program that covers the cost of storage for publicly available high-value cloud-optimized datasets.
Pricing
This is a publicly available data set. No subscription is required.
Legal
Content disclaimer
Vendors are responsible for their product descriptions and other product content. AWS does not warrant that vendors' product descriptions or other product content are accurate, complete, reliable, current, or error-free.
Delivery details
AWS Data Exchange (ADX)
AWS Data Exchange is a service that helps AWS easily share and manage data entitlements from other organizations at scale.
Open data resources
Available with or without an AWS account.
- How to use
- To access these resources, reference the Amazon Resource Name (ARN) using the AWS Command Line Interface (CLI). Learn more
- Description
- CRAM/BAM files (and their corresponding CRAI/BAI indexes) for RNA, WES, and WGS samples released by The Cancer Dependency Map (DepMap) as part of the Cancer Cell Line Encyclopedia (CCLE) project
- Resource type
- S3 bucket
- Amazon Resource Name (ARN)
- arn:aws:s3:::depmap-omics-ccle
- AWS region
- us-east-1
- AWS CLI access (No AWS account required)
- aws s3 ls --no-sign-request s3://depmap-omics-ccle/
- Description
- Notifications for new depmap-omics-ccle data
- Resource type
- SNS topic
- Amazon Resource Name (ARN)
- arn:aws:sns:us-east-1:019511184952:depmap-omics-ccle-object_created
- AWS region
- us-east-1
Resources
Vendor resources
Support
Contact
Managed By
How to cite
The Cancer Dependency Map (DepMap) Cancer Cell Line Encyclopedia (CCLE) Dataset was accessed on DATE from https://registry.opendata.aws/depmap-omics-ccle .
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Enjoy instance sizing suggestions and pricing estimates for AWS from our Cloud Recommendation Engine
Get a clear and easily updated view of IT and application assets across your hybrid IT enterprise
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