Open data
|
Deployed on AWS
A multi-ancestry analysis of 7,221 phenotypes using a generalized mixed model association testing framework, spanning 16,119 genome-wide association studies. We provide standard meta-analysis across all populations and with a leave-one-population-out approach for each trait. The data are provided in tsv format (per phenotype) and Hail MatrixTable (all phenotypes and variants). Metadata is provided in phenotype and variant manifests.
Overview
A multi-ancestry analysis of 7,221 phenotypes using a generalized mixed model association testing framework, spanning 16,119 genome-wide association studies. We provide standard meta-analysis across all populations and with a leave-one-population-out approach for each trait. The data are provided in tsv format (per phenotype) and Hail MatrixTable (all phenotypes and variants). Metadata is provided in phenotype and variant manifests.
Features and programs
Open Data Sponsorship Program
This dataset is part of the Open Data Sponsorship Program, an AWS program that covers the cost of storage for publicly available high-value cloud-optimized datasets.
Pricing
This is a publicly available data set. No subscription is required.
Legal
Content disclaimer
Vendors are responsible for their product descriptions and other product content. AWS does not warrant that vendors' product descriptions or other product content are accurate, complete, reliable, current, or error-free.
Delivery details
AWS Data Exchange (ADX)
AWS Data Exchange is a service that helps AWS easily share and manage data entitlements from other organizations at scale.
Open data resources
Available with or without an AWS account.
- How to use
- To access these resources, reference the Amazon Resource Name (ARN) using the AWS Command Line Interface (CLI). Learn more
- Description
- Summary statistics from Genome Wide Association Studies (GWASes) of multiple ancestries in the UK Biobank, in TSV and Hail formats
- Resource type
- S3 bucket
- Amazon Resource Name (ARN)
- arn:aws:s3:::pan-ukb-us-east-1
- AWS region
- us-east-1
- AWS CLI access (No AWS account required)
- aws s3 ls --no-sign-request s3://pan-ukb-us-east-1/
Resources
Vendor resources
Support
Contact
Managed By
Analytic and Translational Genetics Unit, Massachusetts General Hospital and the Broad Institute
How to cite
UK Biobank Pan-Ancestry Summary Statistics was accessed on DATE from https://registry.opendata.aws/broad-pan-ukb .
License
CC BY-4.0 (usage may be restricted by UK Biobank, more details on the "Downloads page ")
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