Amazon Sagemaker
Amazon SageMaker is a fully-managed platform that enables developers and data scientists to quickly and easily build, train, and deploy machine learning models at any scale. With Amazon SageMaker, all the barriers and complexity that typically slow down developers who want to use machine learning are removed. The service includes models that can be used together or independently to build, train, and deploy your machine learning models.

Extract Biomarkers Free trial
By:
Latest Version:
5.5.4
This model extracts biomarkers, classifies their presence, and links related entities in clinical text
Product Overview
This model is specifically designed to meticulously extract biomarker entities from a diverse array of clinical documents, such as research articles, patient records, and lab reports. By employing sophisticated natural language processing techniques, the model not only detects these critical entities but also classifies sentences to ascertain the presence of biomarkers, providing a nuanced understanding of their context and relevance. Furthermore, it establishes intricate relationships between the extracted entities, which is pivotal for constructing a comprehensive biomarker network. Such capabilities enhance the precision of clinical assessments and facilitate a deeper understanding of patient conditions, potentially leading to more personalized and effective medical interventions.
Key Data
Version
Type
Model Package
Highlights
Extracted Clinical Entity Labels:
- Biomarker
- Biomarker_Result
Relation Extraction Labels: is_finding_of
Classification Model Labels: 1, 0 Classifies sentences to identify the presence(1) or absence(0) of biomarker entities.
Process up to 2 M chars per hour for real-time and up to 3.4 M chars per hour for batch mode.
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Pricing Information
Use this tool to estimate the software and infrastructure costs based your configuration choices. Your usage and costs might be different from this estimate. They will be reflected on your monthly AWS billing reports.
Contact us to request contract pricing for this product.
Estimating your costs
Choose your region and launch option to see the pricing details. Then, modify the estimated price by choosing different instance types.
Version
Region
Software Pricing
Model Realtime Inference$23.76/hr
running on ml.m4.xlarge
Model Batch Transform$47.52/hr
running on ml.m4.2xlarge
Infrastructure PricingWith Amazon SageMaker, you pay only for what you use. Training and inference is billed by the second, with no minimum fees and no upfront commitments. Pricing within Amazon SageMaker is broken down by on-demand ML instances, ML storage, and fees for data processing in notebooks and inference instances.
Learn more about SageMaker pricing
With Amazon SageMaker, you pay only for what you use. Training and inference is billed by the second, with no minimum fees and no upfront commitments. Pricing within Amazon SageMaker is broken down by on-demand ML instances, ML storage, and fees for data processing in notebooks and inference instances.
Learn more about SageMaker pricing
SageMaker Realtime Inference$0.24/host/hr
running on ml.m4.xlarge
SageMaker Batch Transform$0.48/host/hr
running on ml.m4.2xlarge
About Free trial
Try this product for 15 days. There will be no software charges, but AWS infrastructure charges still apply. Free Trials will automatically convert to a paid subscription upon expiration.
Model Realtime Inference
For model deployment as Real-time endpoint in Amazon SageMaker, the software is priced based on hourly pricing that can vary by instance type. Additional infrastructure cost, taxes or fees may apply.InstanceType | Realtime Inference/hr | |
---|---|---|
ml.m4.xlarge Vendor Recommended | $23.76 |
Usage Information
Model input and output details
Input
Summary
- Array of Text Documents
{
"text": [
] }"Text document 1", "Text document 2", ...
- Single Text Document
{
"text": "Single text document"
}
- JSON Lines (JSONL) Format {"text": "Text document 1"} {"text": "Text document 2"}
Input MIME type
application/json, application/jsonlinesSample input data
Sample notebook
Additional Resources
End User License Agreement
By subscribing to this product you agree to terms and conditions outlined in the product End user License Agreement (EULA)
Support Information
Extract Biomarkers
For any assistance, please reach out to support@johnsnowlabs.com.
AWS Infrastructure
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Learn MoreRefund Policy
No refunds are possible.
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