Free | Publicly available
This dataset includes the sequencing and assembly of a reference standard human genome (GM12878) using the MinION nanopore sequencing instrument with the R9.4 1D chemistry.
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Free | Publicly available
This dataset includes the sequencing and assembly of a reference standard human genome (GM12878) using the MinION nanopore sequencing instrument with the R9.4 1D chemistry.
Free | Publicly available
The Aurora Multi-Sensor Dataset is an open, large-scale multi-sensor dataset with highly accurate localization ground truth, captured between January 2017 and February 2018 in the metropolitan area of Pittsburgh, PA, USA by Aurora (via Uber ATG) in collaboration with the University of Toronto. The de-identified dataset contains rich metadata, such as weather and semantic segmentation, and spans all four seasons, rain, snow, overcast and sunny days, different times of day, and a variety of traffic conditions. The Aurora Multi-Sensor Dataset contains data from a 64-beam Velodyne HDL-64E LiDAR sensor and seven 1920x1200-pixel resolution cameras including a forward-facing stereo pair and five wide-angle lenses covering a 360-degree view around the vehicle. This data can be used to develop and evaluate large-scale long-term approaches to autonomous vehicle localization. Its size and diversity make it suitable for a wide range of research areas such as 3D reconstruction, vir[...]
Free | Publicly available
The Wide-field Infrared Survey Explorer (WISE) was a NASA Medium Explorer satellite in low-Earth orbit that conducted an all-sky astronomical imaging survey over four infrared bands from 2010-2011. The AllWISE Data Release combines data from all cryogenic and post-cryogenic survey phases and provides a comprehensive view of the mid-infrared sky. The Images Atlas includes 18,240 FITS image sets at 3.4, 4.6, 12 and 22 microns. The Source Catalog contains position, apparent motion, and flux information for over 747 million objects detected on the Atlas Images.
Free | Publicly available
The OpenCell project is a proteome-scale effort to measure the localization and interactions of human proteins using high-throughput genome engineering to endogenously tag thousands of proteins in the human proteome. This dataset consists of the raw confocal fluorescence microscopy images for all tagged cell lines in the OpenCell library. These images can be interpreted both individually, to determine the localization of particular proteins of interest, and in aggregate, by training machine learning models to classify or quantify subcellular localization patterns.
Free | Publicly available
The Cancer Genome Characterization Initiatives (CGCI) program supports cutting-edge genomics research of adult and pediatric cancers. CGCI investigators develop and apply advanced sequencing methods that examine genomes, exomes, and transcriptomes within various types of tumors. The program includes Burkitt Lymphoma Genome Sequencing Project (BLGSP) project and HIV+ Tumor Molecular Characterization Project - Cervical Cancer (HTMCP-CC) project. The dataset contains open Clinical Supplement, Biospecimen Supplement, RNA-Seq Gene Expression Quantification, miRNA-Seq Isoform Expression Quantification, and miRNA Expression Quantification data. This dataset also contains controlled WGS/Targeted Sequencing/RNA-Seq/miRNA-Seq Aligned Reads, and RNA-Seq Splice Junction Quantification
Free | Publicly available
OpenNeuro is a database of openly-available brain imaging data. The data are shared according to a Creative Commons CC0 license, providing a broad range of brain imaging data to researchers and citizen scientists alike. The database primarily focuses on functional magnetic resonance imaging (fMRI) data, but also includes other imaging modalities including structural and diffusion MRI, electroencephalography (EEG), and magnetoencephalograpy (MEG). OpenfMRI is a project of the Center for Reproducible Neuroscience at Stanford University. Development of the OpenNeuro resource has been funded by the National Science Foundation, National Institute of Mental Health, National Institute on Drug Abuse, and the Laura and John Arnold Foundation.
Free | Publicly available
The study describes integrative analysis of genetic lesions in 574 diffuse large B cell lymphomas (DLBCL) involving exome and transcriptome sequencing, array-based DNA copy number analysis and targeted amplicon resequencing. The dataset contains open RNA-Seq Gene Expression Quantification data.
Free | Publicly available
NASA missions like the Curiosity and Perseverance rovers carry a rich array of instruments suited to collect data and build evidence towards answering if Mars ever had livable environmental conditions. These rovers can collect rock and soil samples and can take measurements that can be used to determine their chemical makeup. Because communication between rovers and Earth is severely constrained, with limited transfer rates and short daily communication windows, scientists have a limited time to analyze the data and make difficult inferences about the chemistry in order to prioritize the next operations and send those instructions back to the rover. This project aimed at building a model to automatically analyze gas chromatography mass spectrometry (GCMS) data collected for Mars exploration in order to help the scientists in their analysis of understanding the past habitability of Mars. More information are available at https://mars.nasa.gov/msl/sp[...]
Free | Publicly available
This dataset contains 8,000+ brain MRIs of 2,000+ patients with brain metastases.
Free | Publicly available
MIMIC-III (‘Medical Information Mart for Intensive Care’) is a large, single-center database comprising information relating to patients admitted to critical care units at a large tertiary care hospital. Data includes vital signs, medications, laboratory measurements, observations and notes charted by care providers, fluid balance, procedure codes, diagnostic codes, imaging reports, hospital length of stay, survival data, and more. The database supports applications including academic and industrial research, quality improvement initiatives, and higher education coursework. The MIMIC-III dataset is freely-available. Researchers seeking to use the database must formally request access. For details, see the getting started page. Once you have a PhysioNet account, you must enable access to the MIMIC-III dataset from your AWS account. To do this, please input your AWS account number
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