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Anaconda with Python 3

Anaconda | Anaconda with Python 3

Linux/Unix, Amazon Linux 2018.03 - 64-bit Amazon Machine Image (AMI)

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    Anaconda-navigator exception

Missing dependencies to run anaconda-navigator

  • March 07, 2019
  • Review verified by AWS Marketplace

Running navigator gives me error:


anaconda-navigator
Traceback (most recent call last):
File "/opt/conda/bin/anaconda-navigator", line 7, in
from anaconda_navigator.app.main import main
File "/opt/conda/lib/python3.7/site-packages/anaconda_navigator/app/main.py", line 22, in
from anaconda_navigator.utils.conda import is_conda_available
File "/opt/conda/lib/python3.7/site-packages/anaconda_navigator/utils/__init__.py", line 15, in
from qtpy.QtGui import QIcon
File "/opt/conda/lib/python3.7/site-packages/qtpy/QtGui.py", line 21, in
from PyQt5.QtGui import *
ImportError: libGL.so.1: cannot open shared object file: No such file or directory



Side note:
Cleaning/Updating all packages didn't help.
Also running conda update generated error and eventually required elevation to root. This is the permission error generated when running conda update with non-root user:

# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<

Traceback (most recent call last):
File "/opt/conda/lib/python3.7/site-packages/conda/exceptions.py", line 819, in __call__
return func(*args, **kwargs)
File "/opt/conda/lib/python3.7/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/opt/conda/lib/python3.7/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/opt/conda/lib/python3.7/site-packages/conda/cli/main_update.py", line 14, in execute
install(args, parser, 'update')
File "/opt/conda/lib/python3.7/site-packages/conda/cli/install.py", line 253, in install
handle_txn(unlink_link_transaction, prefix, args, newenv)
File "/opt/conda/lib/python3.7/site-packages/conda/cli/install.py", line 282, in handle_txn
unlink_link_transaction.execute()
File "/opt/conda/lib/python3.7/site-packages/conda/core/link.py", line 223, in execute
self.verify()
File "/opt/conda/lib/python3.7/site-packages/conda/common/io.py", line 46, in decorated
return f(*args, **kwds)
File "/opt/conda/lib/python3.7/site-packages/conda/core/link.py", line 200, in verify
self.prepare()
File "/opt/conda/lib/python3.7/site-packages/conda/core/link.py", line 192, in prepare
stp.remove_specs, stp.update_specs)
File "/opt/conda/lib/python3.7/site-packages/conda/core/link.py", line 282, in _prepare
mkdir_p(transaction_context['temp_dir'])
File "/opt/conda/lib/python3.7/site-packages/conda/gateways/disk/__init__.py", line 60, in mkdir_p
makedirs(path)
File "/opt/conda/lib/python3.7/os.py", line 221, in makedirs
mkdir(name, mode)
PermissionError: [Errno 13] Permission denied: '/opt/conda/.condatmp'


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