AWS HPC Blog
Tag: Scientific Computing
Best practices for running molecular dynamics simulations on AWS Graviton3E
If you run molecular dynamics simulations, you need to read this. We walk through running benchmarks of popular apps like GROMACS and LAMMPS on new Hpc7g instances and Graviton3E processors. The results – up to 35% better vector performance versus Graviton3! Learn how to optimize your own workflows.
Accelerate drug discovery with NVIDIA BioNeMo Framework on Amazon EKS
This post was contributed by Doruk Ozturk and Ankur Srivastava at AWS, and Neel Patel at NVIDIA. Introduction Drug discovery is a long and expensive process. Pharmaceutical companies must sift through thousands of compound possibilities to find potential new drugs to treat diseases. This process takes multiple years and costs billions of dollars, with the […]
Optimizing MPI application performance on hpc7a by effectively using both EFA devices
Get the inside scoop on optimizing your MPI apps and configuration for AWS’s powerful new Hpc7a instances. Dual rail gives these instances huge networking potential @ 300 Gb/s – if properly used. This post provides benchmarks, sample configs, and real speedup numbers to help you maximize network performance. Whether you run weather simulations, CFD, or other HPC workloads, you’ll find practical tips for your codes.
Build and deploy a 1 TB/s file system in under an hour
Want to set up a high-speed shared file system for your #HPC or #AI workloads in under an hour? Learn how with this new blog post.
Linter rules for Nextflow to improve the detection of errors before runtime
Check out this post to learn how linter rules for Nextflow’s DSL can help you catch errors in your workflows before runtime, which means greater developer productivity, which leads directly to a faster time to science.
Intel Open Omics Acceleration Framework on AWS: fast, cost-efficient, and seamless
With genomics and multi-omics research generating more data than ever, the Open Omics Acceleration Framework from Intel Labs aims to provide a highly productive platform for researchers. Check out recent results in this new blog post.
Using a digital twin for sensitivity analysis to determine sensor placement in a roll-to-roll manufacturing web-line
What’s the best way to select sensors to capture key data for your digital twin without overspending? Check out our latest blog post on using ML and sensitivity studies to optimize sensor selection.
Renewable energy transition: examining the impacts of wind energy through simulation
As we move towards a greener future, understanding wind energy’s climate impacts is key. Check out this blog post by our friends at Whiffle, to learn how large-scale simulations reveal wind power’s effect on our atmosphere.
Choosing the right compute orchestration tool for your research workload
Running big research jobs on AWS but not sure where to start? We break down options like Batch, ECS, EKS, and others to pick the right tool for your needs. Lots of examples for genomics, ML, engineering, and more!
Introducing new alerts to help users detect and react to blocked job queues in AWS Batch
Heads up AWS Batch users! Learn how to get notifications when your job queue gets blocked so you can quickly troubleshoot and keep your workflows moving. Details in our blog.