AWS Government, Education, & Nonprofits Blog

Tag: genomics

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Tracking global antimicrobial resistance among pathogens using Nextflow and AWS

The Centre for Genomic Pathogen Surveillance (CGPS) is based at the Wellcome Genome Campus, Cambridge and The Big Data Institute, University of Oxford in the United Kingdom. Much of its work involves collaborating with laboratories around the world to enhance genomic surveillance by using big data, engineering, training, and genomic capacity building. Ultimately, the Centre hopes to enable the linking and real-time interpretation of data globally to track pathogens and antimicrobial resistance at an affordable rate. Typically, spikes in cost for research are a common challenge for laboratories. With the cloud, the team wanted to mitigate their costs, and particularly those of their partners in low and middle-income countries, by exploring the Amazon Web Services (AWS) Cloud’s pay-as-you-go infrastructure.

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Driving Momentum in Genomics Research: AWS Collaborates with Broad Institute

Cromwell is a workflow management system from Broad Institute of MIT and Harvard, a Cambridge, Massachusetts-based research institute that leverages the power of genomics to help us understand biology as well as treat human disease. Cromwell aims to facilitate scientific workflows for genome analysis. It enables genomic researchers, scientists, developers, and analysts to efficiently run their experiments, without deep expertise in computing capabilities. And it’s now on AWS.

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Genomic and Medical Big Data Go Serverless

Serverless architecture remains on the rise. From simple Alexa Skills to advanced web services, our customers’ use cases are innovative and diverse. Take Commonwealth Scientific and Industrial Research Organization (CSIRO)’s genomics research, for example. “AWS has become versatile and interoperable making it possible to set up complex research workflows as serverless web services,” says CSIRO’s Dr. Denis Bauer. Dr. Bauer and her team created a bioinformatics research tool, GT-Scan2, which Jeff Barr featured two years ago as one of the first examples of serverless architecture for compute-intensive tasks.

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Cloud-Enabled Innovation in Personalized Medical Treatment

Hundreds of thousands of organizations around the world have joined AWS and many are using AWS solutions powered by Intel to build their businesses, scale their operations, and harness their technological innovations. We’re excited about our work with the hospitals and research institutions using bioinformatics to achieve major healthcare breakthroughs and unlock the mysteries of […]

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