AWS Public Sector Blog

Tag: research

coronavirus

Taking COVID in STRIDES: The National Center for Biotechnology Information makes coronavirus genomic data available on AWS

AWS and the National Institutes of Health’s (NIH) National Center for Biotechnology Information (NCBI) announced the creation of the Coronavirus Genome Sequence Dataset to support COVID-19 research. The dataset is hosted by the AWS Open Data Sponsorship Program and accessible on the Registry of Open Data on AWS, providing researchers quick and easy access to coronavirus sequence data at no cost for use in their COVID-19 research.

Ocean skyline

Improving our knowledge about the oceans by providing cloud-based access to large datasets

As a physical oceanographer focused on remote sensing, Dr. Chelle Gentemann, senior scientist at Farallon Institute, has worked for over 20 years on retrievals of ocean temperature from space. She uses measurements of sea surface temperature from satellites to understand how the ocean impacts our lives. Chelle’s work requires analysis of large volumes of data, which requires access to large data storage and computational resources. Although most large research institutions can secure those IT resources, that is not the case for smaller organizations or underserved communities around the world. As part of the Amazon Sustainability Data Initiative, we invited Dr. Gentemann to share her perspective on the value of hosting high-resolution climate data on AWS.

DNA Genotyping and Sequencing. A bioinformatician analyzes DNA integration data

Five things to consider when moving your research workflows to AWS

Research is done differently in the cloud than in an on-premises lab. Research labs looking to move computational research to the cloud should start with their workflows. There are common themes across computational research workflows that researchers should consider as they begin to move their research workflows to AWS.

Flooding in Venice, Italy. Photo courtesy Jonathan Ford

Communicating a national flood risk assessment using AWS

The First Street Foundation is dedicated to communicating the flood and inundation risks posed by a changing environment, with an emphasis on allowing Americans to discover and understand those risks. By building awareness, our hope is that every individual is empowered to take steps to reduce their risk exposure to flooding, as well as that of their communities—today and in the future. First Street created a nationwide assessment of flood risk for the CONUS and DC, and is now sharing that assessment through Flood Factor™.

genomic makeup data

Stanford researchers accelerate autism research by sharing genomic data in the cloud

In 2014, the Wall Lab at Stanford University sought to answer one of the most pressing questions in neuroscience: What genes influence autism spectrum disorder (ASD)? According to the Centers for Disease Control (CDC), this neurodevelopmental disorder affects roughly one in 54 children in America and is on the rise—nearly tripling since 1992. In the lab’s study of ASD genetics, they chose the cloud—and a unique experimental approach—to speed the time to science.

Burned hill at Big Sur

How artificial intelligence helps monitor forest dryness

Forest wildfire risk is increasing in the western United States. In the past five decades, large wildfire frequency and the area destroyed have risen by more than four and six times, respectively. The increased risk posed by wildfires has prompted scientists to try to assess wildfire risk to help inform whether to move people to safety before disastrous wildfires occur.

Five ways researchers can use the cloud

Five ways to use AWS for research (starting right now)

If you are a scientific researcher, you are likely more interested in getting your research done than in the computational resources that you use to do it. You may think about ways to continue your research remotely with the rise in remote work. Did you know the cloud and Amazon Web Services (AWS) can accelerate your research and time to science? Here are five ways.

Photo by person on computer looking COVID-19; Patrick Assalé on Unsplash

Updates and early lessons from our COVID-19 HPC Consortium research partners

The concept of a COVID-19 High Performance Computing (HPC) Consortium emerged from a roundtable discussion at the White House in March and included input from industry, government, and academic leaders. Following the announcement of the consortium, AWS has been collaborating with teams on a growing number of projects to provide cloud computing resources from AWS. I want to share three early learnings and insights into some of the innovative projects on which we are collaborating with the world’s leading researchers.

CyberPatient

Medical students learn through virtual clinical rotations

CyberPatient, a Canadian startup, provides an online, digital learning environment to help medical students around the globe practice skills virtually before they ever enter into clinical rotations or step foot into a hospital. In the platform, students can interact with virtual patients and work through scenarios that mimic real life. As more students turn to virtual learning, CyberPatient’s platform is being offered to medical students at no cost.

Learning pathway researchers

No-cost online AWS training pathway for researchers and research IT

To help researchers learn about cloud computing, AWS curated a list of no-cost, on-demand online courses tailored to researchers’ needs. With the cloud, scientists can quickly analyze massive data pipelines, store petabytes of data, and share their results with collaborators around the world. These online courses are available at any time to help users learn new cloud skills and services.